Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 FOXO1B-201ENST00000504678 1527 ntBASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ZIC4Q8N9L1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 AC004461.1-201ENST00000412461 403 ntBASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 AC084121.4-201ENST00000641598 221 ntBASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 AC134684.3-201ENST00000641758 218 ntBASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 AF228730.8-201ENST00000642140 221 ntBASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 PCDH8P1-201ENST00000428983 2773 ntBASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 PKD1P1-201ENST00000458669 6805 ntBASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.59□□□□□ -0.07
ZIC4Q8N9L1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.58□□□□□ -0.07
ZIC4Q8N9L1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ZIC4Q8N9L1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
ZIC4Q8N9L1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.58□□□□□ -0.07
ZIC4Q8N9L1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ZIC4Q8N9L1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
ZIC4Q8N9L1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ZIC4Q8N9L1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
ZIC4Q8N9L1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 AL592309.1-201ENST00000443127 649 ntBASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 AP006288.1-201ENST00000446065 395 ntBASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 AC069335.1-201ENST00000489972 472 ntBASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 KRT8P23-201ENST00000560090 1207 ntBASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 AC093520.2-201ENST00000561830 333 ntBASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 REXO1L8P-201ENST00000604378 1897 ntBASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.58□□□□□ -0.08
ZIC4Q8N9L1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms