Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC008741.2-201ENST00000612792 3115 ntBASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 TIMM8BP1-201ENST00000452384 211 ntBASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 AC112191.1-201ENST00000523689 701 ntBASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CCDC33Q8N5R6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC33Q8N5R6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms