Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.96■□□□□ 0.31
ATPAF2Q8N5M1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.96■□□□□ 0.31
ATPAF2Q8N5M1 AP002472.1-201ENST00000577490 586 ntBASIC16.96■□□□□ 0.31
ATPAF2Q8N5M1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF2Q8N5M1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF2Q8N5M1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF2Q8N5M1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.96■□□□□ 0.31
ATPAF2Q8N5M1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.96■□□□□ 0.31
ATPAF2Q8N5M1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF2Q8N5M1 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF2Q8N5M1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATPAF2Q8N5M1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
ATPAF2Q8N5M1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATPAF2Q8N5M1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.96■□□□□ 0.3
ATPAF2Q8N5M1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.96■□□□□ 0.3
ATPAF2Q8N5M1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
ATPAF2Q8N5M1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
ATPAF2Q8N5M1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 AC092474.2-201ENST00000424288 719 ntBASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 AL161645.1-201ENST00000622716 1255 ntBASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATPAF2Q8N5M1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 AC016027.1-202ENST00000607927 1699 ntBASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 KRT18P34-201ENST00000488218 1270 ntBASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 AL078644.1-201ENST00000609881 752 ntBASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 AC091812.2-201ENST00000619081 385 ntBASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 AC092364.2-201ENST00000596710 2692 ntBASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
ATPAF2Q8N5M1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms