Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
APLFQ8IW19 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 AC073592.4-201ENST00000623827 446 ntBASIC16.49■□□□□ 0.23
APLFQ8IW19 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.49■□□□□ 0.23
APLFQ8IW19 AL022326.1-202ENST00000641533 845 ntBASIC16.49■□□□□ 0.23
APLFQ8IW19 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
APLFQ8IW19 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.49■□□□□ 0.23
APLFQ8IW19 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.49■□□□□ 0.23
APLFQ8IW19 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
APLFQ8IW19 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
APLFQ8IW19 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
APLFQ8IW19 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
APLFQ8IW19 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
APLFQ8IW19 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
APLFQ8IW19 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
APLFQ8IW19 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
APLFQ8IW19 AP002414.3-201ENST00000589352 1468 ntBASIC16.48■□□□□ 0.23
APLFQ8IW19 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
APLFQ8IW19 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 PMPCAP1-201ENST00000508114 1576 ntBASIC16.48■□□□□ 0.23
APLFQ8IW19 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
APLFQ8IW19 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
APLFQ8IW19 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
APLFQ8IW19 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
APLFQ8IW19 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.48■□□□□ 0.23
APLFQ8IW19 CICP13-201ENST00000422015 2789 ntBASIC16.48■□□□□ 0.23
APLFQ8IW19 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.48■□□□□ 0.23
APLFQ8IW19 AC096633.1-201ENST00000422446 749 ntBASIC16.48■□□□□ 0.23
APLFQ8IW19 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.48■□□□□ 0.23
APLFQ8IW19 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.48■□□□□ 0.23
APLFQ8IW19 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.48■□□□□ 0.23
APLFQ8IW19 AC112482.1-201ENST00000492080 688 ntBASIC16.48■□□□□ 0.23
APLFQ8IW19 AC122714.2-201ENST00000502787 707 ntBASIC16.48■□□□□ 0.23
APLFQ8IW19 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
APLFQ8IW19 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.48■□□□□ 0.23
APLFQ8IW19 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.48■□□□□ 0.23
APLFQ8IW19 AP001160.2-201ENST00000596071 487 ntBASIC16.48■□□□□ 0.23
APLFQ8IW19 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.48■□□□□ 0.23
APLFQ8IW19 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.48■□□□□ 0.23
APLFQ8IW19 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
APLFQ8IW19 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.48■□□□□ 0.23
APLFQ8IW19 AC068587.6-202ENST00000641839 5619 ntBASIC16.48■□□□□ 0.23
APLFQ8IW19 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
APLFQ8IW19 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
APLFQ8IW19 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.48■□□□□ 0.23
APLFQ8IW19 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.48■□□□□ 0.23
APLFQ8IW19 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
APLFQ8IW19 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
APLFQ8IW19 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.48■□□□□ 0.23
APLFQ8IW19 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APLFQ8IW19 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.47■□□□□ 0.23
APLFQ8IW19 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APLFQ8IW19 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APLFQ8IW19 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APLFQ8IW19 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
APLFQ8IW19 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APLFQ8IW19 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APLFQ8IW19 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
APLFQ8IW19 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.47■□□□□ 0.23
APLFQ8IW19 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
APLFQ8IW19 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APLFQ8IW19 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
APLFQ8IW19 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
APLFQ8IW19 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APLFQ8IW19 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
APLFQ8IW19 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
APLFQ8IW19 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
APLFQ8IW19 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
APLFQ8IW19 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
APLFQ8IW19 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.47■□□□□ 0.23
APLFQ8IW19 AC009947.1-201ENST00000444350 727 ntBASIC16.47■□□□□ 0.23
APLFQ8IW19 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.47■□□□□ 0.23
APLFQ8IW19 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.47■□□□□ 0.23
APLFQ8IW19 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
APLFQ8IW19 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.47■□□□□ 0.23
APLFQ8IW19 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.47■□□□□ 0.23
APLFQ8IW19 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.47■□□□□ 0.23
APLFQ8IW19 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.47■□□□□ 0.23
APLFQ8IW19 AC002347.1-201ENST00000569543 541 ntBASIC16.47■□□□□ 0.23
APLFQ8IW19 AC006557.2-201ENST00000592985 1240 ntBASIC16.47■□□□□ 0.23
APLFQ8IW19 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms