Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 AC099568.2-201ENST00000609194 695 ntBASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 AL109936.8-201ENST00000641772 604 ntBASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 GGT4P-201ENST00000623672 1708 ntBASIC17.58■□□□□ 0.4
NPAS4Q8IUM7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NPAS4Q8IUM7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 AL133373.2-201ENST00000623187 2828 ntBASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 AC017083.2-201ENST00000608069 979 ntBASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPAS4Q8IUM7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 AC079776.1-201ENST00000401540 1152 ntBASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 MYCLP2-201ENST00000449268 967 ntBASIC17.55■□□□□ 0.4
NPAS4Q8IUM7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms