Protein–RNA interactions for Protein: Q6VB84

FOXD4L3, Forkhead box protein D4-like 3, humanhuman

Predicted RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L3Q6VB84 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
FOXD4L3Q6VB84 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD4L3Q6VB84 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD4L3Q6VB84 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
FOXD4L3Q6VB84 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
FOXD4L3Q6VB84 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 MTHFR-217ENST00000641820 1569 ntBASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 FAM210CP-201ENST00000445714 574 ntBASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD4L3Q6VB84 AL031731.1-201ENST00000642131 2094 ntBASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD4L3Q6VB84 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXD4L3Q6VB84 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXD4L3Q6VB84 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXD4L3Q6VB84 REXO1L8P-201ENST00000604378 1897 ntBASIC19.39■□□□□ 0.7
FOXD4L3Q6VB84 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
FOXD4L3Q6VB84 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.39■□□□□ 0.7
FOXD4L3Q6VB84 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
FOXD4L3Q6VB84 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
FOXD4L3Q6VB84 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXD4L3Q6VB84 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 AC013467.2-201ENST00000605472 835 ntBASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD4L3Q6VB84 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms