Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 GUSBP12-201ENST00000513727 720 ntBASIC14.51□□□□□ -0.09
C11orf88Q6PI97 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 GPR32P1-201ENST00000601788 811 ntBASIC14.51□□□□□ -0.09
C11orf88Q6PI97 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
C11orf88Q6PI97 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 AP002383.4-201ENST00000442518 975 ntBASIC14.5□□□□□ -0.09
C11orf88Q6PI97 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 AC124947.2-201ENST00000547118 1133 ntBASIC14.5□□□□□ -0.09
C11orf88Q6PI97 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 Z69720.1-201ENST00000601483 472 ntBASIC14.5□□□□□ -0.09
C11orf88Q6PI97 AL121894.2-201ENST00000602977 491 ntBASIC14.5□□□□□ -0.09
C11orf88Q6PI97 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
C11orf88Q6PI97 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 Z83836.1-201ENST00000624605 1642 ntBASIC14.49□□□□□ -0.09
C11orf88Q6PI97 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
C11orf88Q6PI97 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms