Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RFWD3Q6PCD5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RFWD3Q6PCD5 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RFWD3Q6PCD5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RFWD3Q6PCD5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.27■□□□□ 0.35
RFWD3Q6PCD5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 AC092474.2-201ENST00000424288 719 ntBASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 AL391256.1-201ENST00000443260 1855 ntBASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RFWD3Q6PCD5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 AC004461.1-201ENST00000412461 403 ntBASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 AC109635.5-201ENST00000533593 962 ntBASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 AL135744.1-201ENST00000565098 629 ntBASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 AC022145.2-201ENST00000598203 171 ntBASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 AL513210.1-201ENST00000629608 234 ntBASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RFWD3Q6PCD5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms