Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC145285.3-201ENST00000564603 959 ntBASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 AL645728.2-201ENST00000641974 660 ntBASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.43■□□□□ 0.22
ZNF549Q6P9A3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 AL031432.2-201ENST00000566714 459 ntBASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 AL928711.1-201ENST00000570165 459 ntBASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 AC104109.2-201ENST00000602919 1418 ntBASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 AL596087.1-201ENST00000400979 1969 ntBASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
ZNF549Q6P9A3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 KRT18P2-201ENST00000447938 1258 ntBASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 AL031055.1-201ENST00000606362 631 ntBASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 AC008741.2-201ENST00000612792 3115 ntBASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZNF549Q6P9A3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms