Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 AP005482.1-201ENST00000563722 1273 ntBASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 RRP7BP-205ENST00000566851 833 ntBASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 AC092068.3-201ENST00000587894 2016 ntBASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.09■□□□□ 0.17
LYSMD4Q5XG99 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LYSMD4Q5XG99 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
LYSMD4Q5XG99 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.08■□□□□ 0.17
LYSMD4Q5XG99 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.17
LYSMD4Q5XG99 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.08■□□□□ 0.17
LYSMD4Q5XG99 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LYSMD4Q5XG99 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LYSMD4Q5XG99 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LYSMD4Q5XG99 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
LYSMD4Q5XG99 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 AC098850.1-201ENST00000419919 790 ntBASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 KRT223P-202ENST00000449164 1292 ntBASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 TIMM17BP1-201ENST00000545713 516 ntBASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 WFDC1-204ENST00000613603 549 ntBASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 NOC2LP1-202ENST00000452600 2235 ntBASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 PCDHB17P-201ENST00000539533 2393 ntBASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 AL391256.1-201ENST00000443260 1855 ntBASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYSMD4Q5XG99 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 AC104596.2-201ENST00000512793 793 ntBASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.07■□□□□ 0.16
LYSMD4Q5XG99 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms