Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 HMGA1P7-201ENST00000406908 502 ntBASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 MIR3909-201ENST00000579518 119 ntBASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 AC004790.2-201ENST00000623588 572 ntBASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDKAL1Q5VV42 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 AC022532.1-201ENST00000624563 1728 ntBASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKAL1Q5VV42 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 AC021097.1-201ENST00000607902 574 ntBASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 AC092919.2-201ENST00000623631 1645 ntBASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKAL1Q5VV42 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKAL1Q5VV42 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.04■□□□□ 0.48
CDKAL1Q5VV42 AC013268.4-201ENST00000637413 2228 ntBASIC18.04■□□□□ 0.48
CDKAL1Q5VV42 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDKAL1Q5VV42 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDKAL1Q5VV42 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms