Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TTC39BQ5VTQ0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 AC079328.2-201ENST00000561241 3354 ntBASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 CEND1P1-201ENST00000451006 455 ntBASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 AL691403.2-201ENST00000618460 490 ntBASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
TTC39BQ5VTQ0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 PCDHB17P-201ENST00000539533 2393 ntBASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 AL355306.1-201ENST00000415580 579 ntBASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 RN7SL589P-201ENST00000481268 310 ntBASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 AC099522.2-201ENST00000607001 744 ntBASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 AC134684.3-201ENST00000641758 218 ntBASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.22■□□□□ 0.35
TTC39BQ5VTQ0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms