Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 KLF4P1-201ENST00000412782 1185 ntBASIC13.21□□□□□ -0.29
FAM78BQ5VT40 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 AL138831.2-201ENST00000606564 490 ntBASIC13.21□□□□□ -0.29
FAM78BQ5VT40 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
FAM78BQ5VT40 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.21□□□□□ -0.3
FAM78BQ5VT40 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 AL136038.3-201ENST00000561909 1096 ntBASIC13.2□□□□□ -0.3
FAM78BQ5VT40 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 NTF6B-201ENST00000591913 560 ntBASIC13.2□□□□□ -0.3
FAM78BQ5VT40 AC011498.5-201ENST00000592027 486 ntBASIC13.2□□□□□ -0.3
FAM78BQ5VT40 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.2□□□□□ -0.3
FAM78BQ5VT40 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
FAM78BQ5VT40 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms