Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.79■□□□□ 0.28
KHDC1Q4VXA5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 AL591424.1-201ENST00000442569 1213 ntBASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KHDC1Q4VXA5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 FAM185BP-201ENST00000443595 716 ntBASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
KHDC1Q4VXA5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
KHDC1Q4VXA5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.77■□□□□ 0.27
KHDC1Q4VXA5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
KHDC1Q4VXA5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.77■□□□□ 0.27
KHDC1Q4VXA5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
KHDC1Q4VXA5 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
KHDC1Q4VXA5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KHDC1Q4VXA5 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
KHDC1Q4VXA5 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.76■□□□□ 0.27
KHDC1Q4VXA5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
KHDC1Q4VXA5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
KHDC1Q4VXA5 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms