Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC6LQ2NKX8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 FLJ16779-201ENST00000612722 7638 ntBASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 MIR1238-201ENST00000408483 83 ntBASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 AC122714.2-201ENST00000502787 707 ntBASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC6LQ2NKX8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 CICP23-201ENST00000605013 2741 ntBASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 SNX33P1-201ENST00000592116 1762 ntBASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 AL512652.2-201ENST00000625156 1716 ntBASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 TMBIM7P-203ENST00000641617 1718 ntBASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 AC103564.2-201ENST00000432853 1299 ntBASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 ECEL1P2-202ENST00000465689 757 ntBASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 FITM1-202ENST00000559294 800 ntBASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 C2orf69P3-201ENST00000565542 1120 ntBASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 AL353593.2-201ENST00000602529 1483 ntBASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 AL031731.1-201ENST00000642131 2094 ntBASIC17.56■□□□□ 0.4
ERCC6LQ2NKX8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ERCC6LQ2NKX8 AC007191.1-201ENST00000623179 2995 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms