Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.02■□□□□ 0.32
SCAPQ12770 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.02■□□□□ 0.32
SCAPQ12770 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SCAPQ12770 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.02■□□□□ 0.32
SCAPQ12770 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.02■□□□□ 0.32
SCAPQ12770 AL592424.1-201ENST00000563624 1536 ntBASIC17.02■□□□□ 0.32
SCAPQ12770 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SCAPQ12770 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SCAPQ12770 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.02■□□□□ 0.32
SCAPQ12770 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.02■□□□□ 0.32
SCAPQ12770 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 REXO1L8P-201ENST00000604378 1897 ntBASIC17.02■□□□□ 0.32
SCAPQ12770 U82695.1-201ENST00000635752 1889 ntBASIC17.02■□□□□ 0.32
SCAPQ12770 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.02■□□□□ 0.32
SCAPQ12770 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.02■□□□□ 0.32
SCAPQ12770 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.02■□□□□ 0.32
SCAPQ12770 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.02■□□□□ 0.32
SCAPQ12770 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.02■□□□□ 0.32
SCAPQ12770 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.02■□□□□ 0.32
SCAPQ12770 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.02■□□□□ 0.32
SCAPQ12770 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.02■□□□□ 0.32
SCAPQ12770 AC008267.7-201ENST00000624570 1194 ntBASIC17.02■□□□□ 0.32
SCAPQ12770 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.02■□□□□ 0.32
SCAPQ12770 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAPQ12770 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.02■□□□□ 0.32
SCAPQ12770 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.02■□□□□ 0.31
SCAPQ12770 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCAPQ12770 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.02■□□□□ 0.31
SCAPQ12770 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCAPQ12770 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.02■□□□□ 0.31
SCAPQ12770 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
SCAPQ12770 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.01■□□□□ 0.31
SCAPQ12770 TSEN15P1-201ENST00000423257 515 ntBASIC17.01■□□□□ 0.31
SCAPQ12770 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.01■□□□□ 0.31
SCAPQ12770 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.01■□□□□ 0.31
SCAPQ12770 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.01■□□□□ 0.31
SCAPQ12770 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.01■□□□□ 0.31
SCAPQ12770 KRT8P48-201ENST00000515599 1220 ntBASIC17.01■□□□□ 0.31
SCAPQ12770 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.01■□□□□ 0.31
SCAPQ12770 AL138918.1-201ENST00000568306 659 ntBASIC17.01■□□□□ 0.31
SCAPQ12770 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.01■□□□□ 0.31
SCAPQ12770 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.01■□□□□ 0.31
SCAPQ12770 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SCAPQ12770 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.01■□□□□ 0.31
SCAPQ12770 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.01■□□□□ 0.31
SCAPQ12770 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SCAPQ12770 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.01■□□□□ 0.31
SCAPQ12770 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SCAPQ12770 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCAPQ12770 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SCAPQ12770 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCAPQ12770 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCAPQ12770 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17■□□□□ 0.31
SCAPQ12770 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCAPQ12770 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17■□□□□ 0.31
SCAPQ12770 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SCAPQ12770 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SCAPQ12770 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms