Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAE1P78406 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RAE1P78406 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RAE1P78406 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.67■□□□□ 0.1
RAE1P78406 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.67■□□□□ 0.1
RAE1P78406 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.67■□□□□ 0.1
RAE1P78406 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RAE1P78406 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.67■□□□□ 0.1
RAE1P78406 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RAE1P78406 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RAE1P78406 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.67■□□□□ 0.1
RAE1P78406 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.67■□□□□ 0.1
RAE1P78406 KRT19P2-202ENST00000557173 1012 ntBASIC15.67■□□□□ 0.1
RAE1P78406 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.67■□□□□ 0.1
RAE1P78406 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.67■□□□□ 0.1
RAE1P78406 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.67■□□□□ 0.1
RAE1P78406 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RAE1P78406 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.67■□□□□ 0.1
RAE1P78406 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.67■□□□□ 0.1
RAE1P78406 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.67■□□□□ 0.1
RAE1P78406 AC092919.2-201ENST00000623631 1645 ntBASIC15.67■□□□□ 0.1
RAE1P78406 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RAE1P78406 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.67■□□□□ 0.1
RAE1P78406 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.67■□□□□ 0.1
RAE1P78406 BCAR1-209ENST00000546196 1340 ntBASIC15.67■□□□□ 0.1
RAE1P78406 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAE1P78406 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.67■□□□□ 0.1
RAE1P78406 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.66■□□□□ 0.1
RAE1P78406 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
RAE1P78406 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAE1P78406 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.66■□□□□ 0.1
RAE1P78406 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.66■□□□□ 0.1
RAE1P78406 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.66■□□□□ 0.1
RAE1P78406 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.66■□□□□ 0.1
RAE1P78406 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.66■□□□□ 0.1
RAE1P78406 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.66■□□□□ 0.1
RAE1P78406 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAE1P78406 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RAE1P78406 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.66■□□□□ 0.1
RAE1P78406 AC140658.5-201ENST00000438532 169 ntBASIC15.66■□□□□ 0.1
RAE1P78406 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.66■□□□□ 0.1
RAE1P78406 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.66■□□□□ 0.1
RAE1P78406 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.66■□□□□ 0.1
RAE1P78406 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.66■□□□□ 0.1
RAE1P78406 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.66■□□□□ 0.1
RAE1P78406 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.66■□□□□ 0.1
RAE1P78406 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.66■□□□□ 0.1
RAE1P78406 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.66■□□□□ 0.1
RAE1P78406 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RAE1P78406 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.66■□□□□ 0.1
RAE1P78406 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 AC132872.4-202ENST00000622924 2756 ntBASIC15.66■□□□□ 0.1
RAE1P78406 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
RAE1P78406 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAE1P78406 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RAE1P78406 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAE1P78406 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAE1P78406 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
RAE1P78406 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAE1P78406 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.65■□□□□ 0.1
RAE1P78406 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.65■□□□□ 0.1
RAE1P78406 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAE1P78406 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAE1P78406 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAE1P78406 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAE1P78406 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
RAE1P78406 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms