Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SPCS3P61009 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.54□□□□□ -0.24
SPCS3P61009 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.54□□□□□ -0.24
SPCS3P61009 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
SPCS3P61009 RCN1P2-201ENST00000398357 915 ntBASIC13.54□□□□□ -0.24
SPCS3P61009 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.54□□□□□ -0.24
SPCS3P61009 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.54□□□□□ -0.24
SPCS3P61009 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.54□□□□□ -0.24
SPCS3P61009 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.54□□□□□ -0.24
SPCS3P61009 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
SPCS3P61009 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.54□□□□□ -0.24
SPCS3P61009 AL121956.5-201ENST00000625261 221 ntBASIC13.54□□□□□ -0.24
SPCS3P61009 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.54□□□□□ -0.24
SPCS3P61009 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.54□□□□□ -0.24
SPCS3P61009 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.54□□□□□ -0.24
SPCS3P61009 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.54□□□□□ -0.24
SPCS3P61009 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 AC016734.2-201ENST00000624325 1377 ntBASIC13.54□□□□□ -0.24
SPCS3P61009 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SPCS3P61009 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.54□□□□□ -0.24
SPCS3P61009 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.54□□□□□ -0.24
SPCS3P61009 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SPCS3P61009 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.54□□□□□ -0.24
SPCS3P61009 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SPCS3P61009 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SPCS3P61009 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SPCS3P61009 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 NORAD-201ENST00000565493 5339 ntBASIC13.53□□□□□ -0.24
SPCS3P61009 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SPCS3P61009 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SPCS3P61009 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SPCS3P61009 KRT17P6-201ENST00000453795 1220 ntBASIC13.53□□□□□ -0.24
SPCS3P61009 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.53□□□□□ -0.24
SPCS3P61009 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 BNIP3P18-201ENST00000593976 575 ntBASIC13.53□□□□□ -0.24
SPCS3P61009 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SPCS3P61009 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 TERC-201ENST00000602385 541 ntBASIC13.53□□□□□ -0.24
SPCS3P61009 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 AC004817.3-201ENST00000602957 2129 ntBASIC13.53□□□□□ -0.24
SPCS3P61009 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.53□□□□□ -0.24
SPCS3P61009 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.53□□□□□ -0.24
SPCS3P61009 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SPCS3P61009 CR383656.2-201ENST00000548656 2254 ntBASIC13.53□□□□□ -0.24
SPCS3P61009 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.53□□□□□ -0.24
SPCS3P61009 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.53□□□□□ -0.24
SPCS3P61009 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SPCS3P61009 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SPCS3P61009 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.53□□□□□ -0.24
SPCS3P61009 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SPCS3P61009 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms