Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.95□□□□□ -0.02
SUMO3P55854 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SUMO3P55854 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.95□□□□□ -0.02
SUMO3P55854 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.95□□□□□ -0.02
SUMO3P55854 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SUMO3P55854 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.95□□□□□ -0.02
SUMO3P55854 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SUMO3P55854 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.95□□□□□ -0.02
SUMO3P55854 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.95□□□□□ -0.02
SUMO3P55854 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SUMO3P55854 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SUMO3P55854 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SUMO3P55854 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.94□□□□□ -0.02
SUMO3P55854 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
SUMO3P55854 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SUMO3P55854 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SUMO3P55854 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.94□□□□□ -0.02
SUMO3P55854 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.94□□□□□ -0.02
SUMO3P55854 AL592424.1-201ENST00000563624 1536 ntBASIC14.94□□□□□ -0.02
SUMO3P55854 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SUMO3P55854 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SUMO3P55854 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
SUMO3P55854 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.94□□□□□ -0.02
SUMO3P55854 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.94□□□□□ -0.02
SUMO3P55854 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.94□□□□□ -0.02
SUMO3P55854 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.94□□□□□ -0.02
SUMO3P55854 AL365330.1-201ENST00000607459 531 ntBASIC14.94□□□□□ -0.02
SUMO3P55854 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.94□□□□□ -0.02
SUMO3P55854 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
SUMO3P55854 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SUMO3P55854 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SUMO3P55854 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SUMO3P55854 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.94□□□□□ -0.02
SUMO3P55854 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SUMO3P55854 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
SUMO3P55854 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.94□□□□□ -0.02
SUMO3P55854 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.94□□□□□ -0.02
SUMO3P55854 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SUMO3P55854 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.93□□□□□ -0.02
SUMO3P55854 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.93□□□□□ -0.02
SUMO3P55854 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SUMO3P55854 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
SUMO3P55854 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SUMO3P55854 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
SUMO3P55854 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.93□□□□□ -0.02
SUMO3P55854 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
SUMO3P55854 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 RPSAP43-201ENST00000402237 625 ntBASIC14.93□□□□□ -0.02
SUMO3P55854 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.93□□□□□ -0.02
SUMO3P55854 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.93□□□□□ -0.02
SUMO3P55854 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.93□□□□□ -0.02
SUMO3P55854 CEND1P1-201ENST00000451006 455 ntBASIC14.93□□□□□ -0.02
SUMO3P55854 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.93□□□□□ -0.02
SUMO3P55854 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SUMO3P55854 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.93□□□□□ -0.02
SUMO3P55854 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.93□□□□□ -0.02
SUMO3P55854 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.93□□□□□ -0.02
SUMO3P55854 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.93□□□□□ -0.02
SUMO3P55854 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.93□□□□□ -0.02
SUMO3P55854 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.93□□□□□ -0.02
SUMO3P55854 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.93□□□□□ -0.02
SUMO3P55854 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
SUMO3P55854 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SUMO3P55854 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.93□□□□□ -0.02
SUMO3P55854 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SUMO3P55854 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms