Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.48■□□□□ 0.23
NUBP1P53384 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.48■□□□□ 0.23
NUBP1P53384 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.48■□□□□ 0.23
NUBP1P53384 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.48■□□□□ 0.23
NUBP1P53384 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.48■□□□□ 0.23
NUBP1P53384 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
NUBP1P53384 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 CLK3P2-201ENST00000427566 1453 ntBASIC16.48■□□□□ 0.23
NUBP1P53384 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.48■□□□□ 0.23
NUBP1P53384 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.48■□□□□ 0.23
NUBP1P53384 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.47■□□□□ 0.23
NUBP1P53384 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.47■□□□□ 0.23
NUBP1P53384 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.47■□□□□ 0.23
NUBP1P53384 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
NUBP1P53384 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NUBP1P53384 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.47■□□□□ 0.23
NUBP1P53384 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 RNU4-40P-201ENST00000364351 143 ntBASIC16.47■□□□□ 0.23
NUBP1P53384 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC16.47■□□□□ 0.23
NUBP1P53384 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 AC005229.1-201ENST00000392885 409 ntBASIC16.47■□□□□ 0.23
NUBP1P53384 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 AL390835.1-201ENST00000413941 901 ntTSL 5 BASIC16.47■□□□□ 0.23
NUBP1P53384 MTND2P2-201ENST00000434633 945 ntBASIC16.47■□□□□ 0.23
NUBP1P53384 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.47■□□□□ 0.23
NUBP1P53384 AC104629.2-201ENST00000468627 598 ntBASIC16.47■□□□□ 0.23
NUBP1P53384 AC010460.2-201ENST00000509054 677 ntBASIC16.47■□□□□ 0.23
NUBP1P53384 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.47■□□□□ 0.23
NUBP1P53384 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC16.47■□□□□ 0.23
NUBP1P53384 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.47■□□□□ 0.23
NUBP1P53384 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.47■□□□□ 0.23
NUBP1P53384 ZNF92P2-201ENST00000600543 1059 ntBASIC16.47■□□□□ 0.23
NUBP1P53384 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.47■□□□□ 0.23
NUBP1P53384 AC243960.7-201ENST00000623532 707 ntBASIC16.47■□□□□ 0.23
NUBP1P53384 AC008993.2-201ENST00000631744 806 ntBASIC16.47■□□□□ 0.23
NUBP1P53384 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC16.47■□□□□ 0.23
NUBP1P53384 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NUBP1P53384 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
NUBP1P53384 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.47■□□□□ 0.23
NUBP1P53384 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NUBP1P53384 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NUBP1P53384 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
NUBP1P53384 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NUBP1P53384 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.46■□□□□ 0.23
NUBP1P53384 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.46■□□□□ 0.23
NUBP1P53384 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.46■□□□□ 0.23
NUBP1P53384 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC16.46■□□□□ 0.23
NUBP1P53384 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC16.46■□□□□ 0.23
NUBP1P53384 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC16.46■□□□□ 0.23
NUBP1P53384 MTND2P38-201ENST00000522536 667 ntBASIC16.46■□□□□ 0.23
NUBP1P53384 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.46■□□□□ 0.23
NUBP1P53384 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC16.46■□□□□ 0.23
NUBP1P53384 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC16.46■□□□□ 0.23
NUBP1P53384 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.46■□□□□ 0.23
NUBP1P53384 AC012309.1-203ENST00000585860 965 ntTSL 5 BASIC16.46■□□□□ 0.23
NUBP1P53384 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC16.46■□□□□ 0.23
NUBP1P53384 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 AL365330.1-201ENST00000607459 531 ntBASIC16.46■□□□□ 0.23
NUBP1P53384 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NUBP1P53384 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NUBP1P53384 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.46■□□□□ 0.23
NUBP1P53384 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NUBP1P53384 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.46■□□□□ 0.23
NUBP1P53384 EGFEM1P-202ENST00000431685 1563 ntBASIC16.46■□□□□ 0.23
NUBP1P53384 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NUBP1P53384 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.46■□□□□ 0.22
NUBP1P53384 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.46■□□□□ 0.22
NUBP1P53384 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NUBP1P53384 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
NUBP1P53384 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms