Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN4P51793 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN4P51793 OR6D1P-202ENST00000641007 5290 ntBASIC17.29■□□□□ 0.36
CLCN4P51793 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CLCN4P51793 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCN4P51793 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN4P51793 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN4P51793 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN4P51793 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN4P51793 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCN4P51793 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CLCN4P51793 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN4P51793 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLCN4P51793 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN4P51793 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN4P51793 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
CLCN4P51793 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCN4P51793 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN4P51793 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCN4P51793 AC093724.1-201ENST00000448659 1027 ntBASIC17.29■□□□□ 0.36
CLCN4P51793 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCN4P51793 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CLCN4P51793 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.29■□□□□ 0.36
CLCN4P51793 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCN4P51793 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN4P51793 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCN4P51793 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN4P51793 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCN4P51793 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN4P51793 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN4P51793 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLCN4P51793 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN4P51793 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLCN4P51793 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN4P51793 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLCN4P51793 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLCN4P51793 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN4P51793 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN4P51793 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCN4P51793 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCN4P51793 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCN4P51793 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCN4P51793 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLCN4P51793 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLCN4P51793 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN4P51793 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.28■□□□□ 0.36
CLCN4P51793 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLCN4P51793 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.28■□□□□ 0.36
CLCN4P51793 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLCN4P51793 SPDYE19P-201ENST00000338590 713 ntBASIC17.28■□□□□ 0.36
CLCN4P51793 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CLCN4P51793 AC087499.6-201ENST00000411576 835 ntBASIC17.28■□□□□ 0.36
CLCN4P51793 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.28■□□□□ 0.36
CLCN4P51793 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLCN4P51793 GIMAP3P-201ENST00000495150 836 ntBASIC17.28■□□□□ 0.36
CLCN4P51793 DOC2GP-202ENST00000514950 1163 ntBASIC17.28■□□□□ 0.36
CLCN4P51793 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLCN4P51793 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 AC044860.1-202ENST00000559481 777 ntBASIC17.28■□□□□ 0.36
CLCN4P51793 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLCN4P51793 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.28■□□□□ 0.36
CLCN4P51793 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN4P51793 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CLCN4P51793 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN4P51793 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.27■□□□□ 0.36
CLCN4P51793 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN4P51793 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN4P51793 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.27■□□□□ 0.36
CLCN4P51793 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN4P51793 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN4P51793 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN4P51793 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.27■□□□□ 0.36
CLCN4P51793 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN4P51793 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN4P51793 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN4P51793 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLCN4P51793 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLCN4P51793 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms