Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP9P49458 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP9P49458 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
SRP9P49458 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.75□□□□□ -0.05
SRP9P49458 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.75□□□□□ -0.05
SRP9P49458 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SRP9P49458 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.75□□□□□ -0.05
SRP9P49458 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.75□□□□□ -0.05
SRP9P49458 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SRP9P49458 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.75□□□□□ -0.05
SRP9P49458 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.75□□□□□ -0.05
SRP9P49458 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SRP9P49458 AL391256.1-201ENST00000443260 1855 ntBASIC14.75□□□□□ -0.05
SRP9P49458 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SRP9P49458 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SRP9P49458 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SRP9P49458 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SRP9P49458 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP9P49458 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.74□□□□□ -0.05
SRP9P49458 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SRP9P49458 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SRP9P49458 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SRP9P49458 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.74□□□□□ -0.05
SRP9P49458 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SRP9P49458 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP9P49458 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP9P49458 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
SRP9P49458 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 RPS2P28-201ENST00000314255 741 ntBASIC14.74□□□□□ -0.05
SRP9P49458 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.74□□□□□ -0.05
SRP9P49458 FAM197Y8-203ENST00000450145 560 ntBASIC14.74□□□□□ -0.05
SRP9P49458 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP9P49458 SART3-203ENST00000546611 1184 ntBASIC14.74□□□□□ -0.05
SRP9P49458 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.74□□□□□ -0.05
SRP9P49458 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.74□□□□□ -0.05
SRP9P49458 MTDHP4-201ENST00000600287 670 ntBASIC14.74□□□□□ -0.05
SRP9P49458 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP9P49458 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP9P49458 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP9P49458 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.74□□□□□ -0.05
SRP9P49458 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.74□□□□□ -0.05
SRP9P49458 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.74□□□□□ -0.05
SRP9P49458 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SRP9P49458 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms