Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.78■□□□□ 0.28
GRIA1P42261 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.78■□□□□ 0.28
GRIA1P42261 VN2R19P-201ENST00000442399 1052 ntBASIC16.78■□□□□ 0.28
GRIA1P42261 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GRIA1P42261 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GRIA1P42261 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
GRIA1P42261 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
GRIA1P42261 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.78■□□□□ 0.28
GRIA1P42261 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.78■□□□□ 0.28
GRIA1P42261 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GRIA1P42261 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.78■□□□□ 0.28
GRIA1P42261 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
GRIA1P42261 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
GRIA1P42261 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
GRIA1P42261 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA1P42261 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA1P42261 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA1P42261 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA1P42261 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.77■□□□□ 0.28
GRIA1P42261 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA1P42261 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA1P42261 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA1P42261 HLA-A-201ENST00000376802 1334 ntBASIC16.77■□□□□ 0.28
GRIA1P42261 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA1P42261 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.77■□□□□ 0.28
GRIA1P42261 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA1P42261 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA1P42261 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA1P42261 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
GRIA1P42261 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA1P42261 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
GRIA1P42261 RNU1-129P-201ENST00000384064 167 ntBASIC16.77■□□□□ 0.28
GRIA1P42261 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.77■□□□□ 0.28
GRIA1P42261 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA1P42261 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA1P42261 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
GRIA1P42261 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.77■□□□□ 0.28
GRIA1P42261 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.77■□□□□ 0.28
GRIA1P42261 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA1P42261 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
GRIA1P42261 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.77■□□□□ 0.28
GRIA1P42261 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GRIA1P42261 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
GRIA1P42261 AP001005.1-201ENST00000571755 1248 ntBASIC16.77■□□□□ 0.28
GRIA1P42261 U1.21-201ENST00000580816 167 ntBASIC16.77■□□□□ 0.28
GRIA1P42261 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.77■□□□□ 0.28
GRIA1P42261 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.77■□□□□ 0.28
GRIA1P42261 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.77■□□□□ 0.28
GRIA1P42261 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.77■□□□□ 0.28
GRIA1P42261 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GRIA1P42261 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
GRIA1P42261 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
GRIA1P42261 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA1P42261 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA1P42261 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA1P42261 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA1P42261 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA1P42261 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.77■□□□□ 0.27
GRIA1P42261 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.77■□□□□ 0.27
GRIA1P42261 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA1P42261 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
GRIA1P42261 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
GRIA1P42261 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA1P42261 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA1P42261 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GRIA1P42261 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.77■□□□□ 0.27
GRIA1P42261 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
GRIA1P42261 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
GRIA1P42261 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
GRIA1P42261 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
GRIA1P42261 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.76■□□□□ 0.27
GRIA1P42261 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
GRIA1P42261 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.76■□□□□ 0.27
GRIA1P42261 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.76■□□□□ 0.27
GRIA1P42261 HCG4B-203ENST00000450128 991 ntBASIC16.76■□□□□ 0.27
GRIA1P42261 AL513480.1-201ENST00000451731 511 ntBASIC16.76■□□□□ 0.27
GRIA1P42261 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.76■□□□□ 0.27
GRIA1P42261 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.76■□□□□ 0.27
GRIA1P42261 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.76■□□□□ 0.27
GRIA1P42261 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.76■□□□□ 0.27
GRIA1P42261 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
GRIA1P42261 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GRIA1P42261 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
GRIA1P42261 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms