Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.77■□□□□ 0.6
CNGA1P29973 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.77■□□□□ 0.6
CNGA1P29973 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.77■□□□□ 0.6
CNGA1P29973 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.77■□□□□ 0.6
CNGA1P29973 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.77■□□□□ 0.6
CNGA1P29973 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.77■□□□□ 0.6
CNGA1P29973 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CNGA1P29973 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CNGA1P29973 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNGA1P29973 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
CNGA1P29973 AL035456.1-201ENST00000456064 1369 ntBASIC18.77■□□□□ 0.6
CNGA1P29973 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
CNGA1P29973 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CNGA1P29973 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNGA1P29973 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CNGA1P29973 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNGA1P29973 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
CNGA1P29973 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.77■□□□□ 0.59
CNGA1P29973 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.77■□□□□ 0.59
CNGA1P29973 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CNGA1P29973 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CNGA1P29973 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CNGA1P29973 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.76■□□□□ 0.59
CNGA1P29973 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CNGA1P29973 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.76■□□□□ 0.59
CNGA1P29973 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CNGA1P29973 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.76■□□□□ 0.59
CNGA1P29973 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.76■□□□□ 0.59
CNGA1P29973 AC009477.1-201ENST00000452936 217 ntBASIC18.76■□□□□ 0.59
CNGA1P29973 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.76■□□□□ 0.59
CNGA1P29973 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.76■□□□□ 0.59
CNGA1P29973 AC009407.1-201ENST00000568958 598 ntBASIC18.76■□□□□ 0.59
CNGA1P29973 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.76■□□□□ 0.59
CNGA1P29973 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.76■□□□□ 0.59
CNGA1P29973 AC099398.1-201ENST00000567919 2776 ntBASIC18.76■□□□□ 0.59
CNGA1P29973 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 AL021920.2-201ENST00000624828 1351 ntBASIC18.76■□□□□ 0.59
CNGA1P29973 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CNGA1P29973 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.76■□□□□ 0.59
CNGA1P29973 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CNGA1P29973 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNGA1P29973 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.75■□□□□ 0.59
CNGA1P29973 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.75■□□□□ 0.59
CNGA1P29973 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.75■□□□□ 0.59
CNGA1P29973 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CNGA1P29973 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.75■□□□□ 0.59
CNGA1P29973 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.75■□□□□ 0.59
CNGA1P29973 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.75■□□□□ 0.59
CNGA1P29973 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.75■□□□□ 0.59
CNGA1P29973 AL353779.1-201ENST00000434793 351 ntBASIC18.75■□□□□ 0.59
CNGA1P29973 U91328.1-201ENST00000437528 223 ntBASIC18.75■□□□□ 0.59
CNGA1P29973 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CNGA1P29973 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.75■□□□□ 0.59
CNGA1P29973 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.75■□□□□ 0.59
CNGA1P29973 PRYP6-201ENST00000514804 343 ntBASIC18.75■□□□□ 0.59
CNGA1P29973 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.75■□□□□ 0.59
CNGA1P29973 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.75■□□□□ 0.59
CNGA1P29973 AC140912.1-201ENST00000577171 1054 ntBASIC18.75■□□□□ 0.59
CNGA1P29973 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.75■□□□□ 0.59
CNGA1P29973 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.75■□□□□ 0.59
CNGA1P29973 AC073389.1-201ENST00000595595 795 ntBASIC18.75■□□□□ 0.59
CNGA1P29973 TEX28P1-201ENST00000613479 1221 ntBASIC18.75■□□□□ 0.59
CNGA1P29973 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNGA1P29973 TEX28P2-201ENST00000617764 1221 ntBASIC18.75■□□□□ 0.59
CNGA1P29973 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms