Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VARSP26640 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VARSP26640 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
VARSP26640 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
VARSP26640 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VARSP26640 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
VARSP26640 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
VARSP26640 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
VARSP26640 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VARSP26640 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.33■□□□□ 0.2
VARSP26640 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
VARSP26640 RPSAP43-201ENST00000402237 625 ntBASIC16.33■□□□□ 0.2
VARSP26640 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.33■□□□□ 0.2
VARSP26640 GPX1P2-201ENST00000429271 606 ntBASIC16.33■□□□□ 0.2
VARSP26640 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
VARSP26640 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.33■□□□□ 0.2
VARSP26640 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.33■□□□□ 0.2
VARSP26640 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.33■□□□□ 0.2
VARSP26640 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 AP001160.2-201ENST00000596071 487 ntBASIC16.33■□□□□ 0.2
VARSP26640 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 PGM5P2-202ENST00000637225 1043 ntBASIC16.33■□□□□ 0.2
VARSP26640 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VARSP26640 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
VARSP26640 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.33■□□□□ 0.2
VARSP26640 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VARSP26640 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VARSP26640 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VARSP26640 AL391256.1-201ENST00000443260 1855 ntBASIC16.33■□□□□ 0.2
VARSP26640 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.33■□□□□ 0.2
VARSP26640 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VARSP26640 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.33■□□□□ 0.2
VARSP26640 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VARSP26640 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.32■□□□□ 0.2
VARSP26640 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.32■□□□□ 0.2
VARSP26640 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
VARSP26640 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
VARSP26640 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.32■□□□□ 0.2
VARSP26640 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.32■□□□□ 0.2
VARSP26640 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
VARSP26640 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC16.32■□□□□ 0.2
VARSP26640 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.32■□□□□ 0.2
VARSP26640 IGHV3-65-201ENST00000523210 341 ntBASIC16.32■□□□□ 0.2
VARSP26640 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.32■□□□□ 0.2
VARSP26640 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.32■□□□□ 0.2
VARSP26640 AC034105.1-201ENST00000563488 319 ntBASIC16.32■□□□□ 0.2
VARSP26640 AC002347.1-201ENST00000569543 541 ntBASIC16.32■□□□□ 0.2
VARSP26640 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VARSP26640 AC008667.4-201ENST00000607370 168 ntBASIC16.32■□□□□ 0.2
VARSP26640 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.32■□□□□ 0.2
VARSP26640 AC005593.1-201ENST00000624894 515 ntBASIC16.32■□□□□ 0.2
VARSP26640 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.32■□□□□ 0.2
VARSP26640 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VARSP26640 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.31■□□□□ 0.2
VARSP26640 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.31■□□□□ 0.2
VARSP26640 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARSP26640 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARSP26640 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARSP26640 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VARSP26640 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARSP26640 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARSP26640 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARSP26640 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.31■□□□□ 0.2
VARSP26640 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARSP26640 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VARSP26640 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARSP26640 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
VARSP26640 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VARSP26640 AC004832.2-201ENST00000426397 482 ntBASIC16.31■□□□□ 0.2
VARSP26640 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.31■□□□□ 0.2
VARSP26640 AC004967.1-201ENST00000453589 447 ntBASIC16.31■□□□□ 0.2
VARSP26640 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.31■□□□□ 0.2
VARSP26640 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.31■□□□□ 0.2
VARSP26640 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.31■□□□□ 0.2
VARSP26640 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.31■□□□□ 0.2
VARSP26640 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms