Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 AL662844.4-201ENST00000606367 2838 ntBASIC14.65□□□□□ -0.06
MSR1P21757 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
MSR1P21757 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
MSR1P21757 CYP2T1P-202ENST00000641596 2535 ntBASIC14.64□□□□□ -0.07
MSR1P21757 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.64□□□□□ -0.07
MSR1P21757 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
MSR1P21757 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.64□□□□□ -0.07
MSR1P21757 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.64□□□□□ -0.07
MSR1P21757 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.64□□□□□ -0.07
MSR1P21757 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.64□□□□□ -0.07
MSR1P21757 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 RNU1-129P-201ENST00000384064 167 ntBASIC14.64□□□□□ -0.07
MSR1P21757 HMGA1P7-201ENST00000406908 502 ntBASIC14.64□□□□□ -0.07
MSR1P21757 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
MSR1P21757 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.64□□□□□ -0.07
MSR1P21757 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.64□□□□□ -0.07
MSR1P21757 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.64□□□□□ -0.07
MSR1P21757 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
MSR1P21757 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.64□□□□□ -0.07
MSR1P21757 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
MSR1P21757 U1.21-201ENST00000580816 167 ntBASIC14.64□□□□□ -0.07
MSR1P21757 AL121894.2-201ENST00000602977 491 ntBASIC14.64□□□□□ -0.07
MSR1P21757 AC021097.1-201ENST00000607902 574 ntBASIC14.64□□□□□ -0.07
MSR1P21757 AC010507.1-201ENST00000633895 436 ntBASIC14.64□□□□□ -0.07
MSR1P21757 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
MSR1P21757 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.64□□□□□ -0.07
MSR1P21757 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MSR1P21757 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.64□□□□□ -0.07
MSR1P21757 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.64□□□□□ -0.07
MSR1P21757 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.64□□□□□ -0.07
MSR1P21757 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
MSR1P21757 LINC01144-201ENST00000626198 1710 ntBASIC14.63□□□□□ -0.07
MSR1P21757 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.63□□□□□ -0.07
MSR1P21757 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
MSR1P21757 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
MSR1P21757 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MSR1P21757 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.63□□□□□ -0.07
MSR1P21757 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.63□□□□□ -0.07
MSR1P21757 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.63□□□□□ -0.07
MSR1P21757 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 AC005052.1-201ENST00000625181 2492 ntBASIC14.63□□□□□ -0.07
MSR1P21757 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MSR1P21757 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.63□□□□□ -0.07
MSR1P21757 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
MSR1P21757 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.63□□□□□ -0.07
MSR1P21757 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
MSR1P21757 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.63□□□□□ -0.07
MSR1P21757 MIR3909-201ENST00000579518 119 ntBASIC14.63□□□□□ -0.07
MSR1P21757 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.63□□□□□ -0.07
MSR1P21757 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 AL031055.1-201ENST00000606362 631 ntBASIC14.63□□□□□ -0.07
MSR1P21757 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.63□□□□□ -0.07
MSR1P21757 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.63□□□□□ -0.07
MSR1P21757 AC007064.4-201ENST00000637740 555 ntBASIC14.63□□□□□ -0.07
MSR1P21757 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
MSR1P21757 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
MSR1P21757 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.63□□□□□ -0.07
MSR1P21757 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.63□□□□□ -0.07
MSR1P21757 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.63□□□□□ -0.07
MSR1P21757 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.63□□□□□ -0.07
MSR1P21757 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
MSR1P21757 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
MSR1P21757 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MSR1P21757 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.62□□□□□ -0.07
MSR1P21757 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MSR1P21757 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MSR1P21757 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MSR1P21757 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MSR1P21757 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
MSR1P21757 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.62□□□□□ -0.07
MSR1P21757 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
MSR1P21757 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms