Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ATF1P18846 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ATF1P18846 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATF1P18846 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATF1P18846 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.58□□□□□ -0.08
ATF1P18846 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.58□□□□□ -0.08
ATF1P18846 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ATF1P18846 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.58□□□□□ -0.08
ATF1P18846 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 AC132008.2-207ENST00000454517 770 ntBASIC14.58□□□□□ -0.08
ATF1P18846 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.58□□□□□ -0.08
ATF1P18846 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ATF1P18846 AC138894.3-201ENST00000603787 634 ntBASIC14.58□□□□□ -0.08
ATF1P18846 AC091076.1-201ENST00000610741 619 ntBASIC14.58□□□□□ -0.08
ATF1P18846 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.58□□□□□ -0.08
ATF1P18846 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ATF1P18846 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ATF1P18846 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.58□□□□□ -0.08
ATF1P18846 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
ATF1P18846 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.58□□□□□ -0.08
ATF1P18846 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.58□□□□□ -0.08
ATF1P18846 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 AL671710.1-201ENST00000610245 2349 ntBASIC14.58□□□□□ -0.08
ATF1P18846 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.58□□□□□ -0.08
ATF1P18846 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATF1P18846 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.57□□□□□ -0.08
ATF1P18846 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.57□□□□□ -0.08
ATF1P18846 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.57□□□□□ -0.08
ATF1P18846 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 LINC02228-204ENST00000642115 2962 ntBASIC14.57□□□□□ -0.08
ATF1P18846 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.57□□□□□ -0.08
ATF1P18846 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 BX005266.1-201ENST00000473402 457 ntBASIC14.57□□□□□ -0.08
ATF1P18846 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
ATF1P18846 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.57□□□□□ -0.08
ATF1P18846 AP001269.4-201ENST00000609611 512 ntBASIC14.57□□□□□ -0.08
ATF1P18846 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ATF1P18846 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.57□□□□□ -0.08
ATF1P18846 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ATF1P18846 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ATF1P18846 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
ATF1P18846 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 AP002414.2-201ENST00000591780 3365 ntBASIC14.57□□□□□ -0.08
ATF1P18846 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.57□□□□□ -0.08
ATF1P18846 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
ATF1P18846 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.57□□□□□ -0.08
ATF1P18846 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATF1P18846 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ATF1P18846 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ATF1P18846 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATF1P18846 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ATF1P18846 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.56□□□□□ -0.08
ATF1P18846 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.56□□□□□ -0.08
ATF1P18846 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATF1P18846 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATF1P18846 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ATF1P18846 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.56□□□□□ -0.08
ATF1P18846 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ATF1P18846 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.56□□□□□ -0.08
ATF1P18846 AL022326.1-202ENST00000641533 845 ntBASIC14.56□□□□□ -0.08
ATF1P18846 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.56□□□□□ -0.08
ATF1P18846 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
ATF1P18846 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ATF1P18846 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms