Protein–RNA interactions for Protein: P17544

ATF7, Cyclic AMP-dependent transcription factor ATF-7, humanhuman

Predicted RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF7P17544 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF7P17544 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF7P17544 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF7P17544 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATF7P17544 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.15■□□□□ 0.5
ATF7P17544 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.15■□□□□ 0.5
ATF7P17544 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ATF7P17544 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.15■□□□□ 0.5
ATF7P17544 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATF7P17544 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.15■□□□□ 0.5
ATF7P17544 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.15■□□□□ 0.5
ATF7P17544 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ATF7P17544 AL138918.1-201ENST00000568306 659 ntBASIC18.15■□□□□ 0.5
ATF7P17544 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF7P17544 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF7P17544 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF7P17544 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.15■□□□□ 0.5
ATF7P17544 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF7P17544 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF7P17544 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATF7P17544 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ATF7P17544 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATF7P17544 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.14■□□□□ 0.5
ATF7P17544 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATF7P17544 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATF7P17544 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.5
ATF7P17544 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
ATF7P17544 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ATF7P17544 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.14■□□□□ 0.49
ATF7P17544 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
ATF7P17544 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.14■□□□□ 0.49
ATF7P17544 AC055876.3-201ENST00000431496 288 ntBASIC18.14■□□□□ 0.49
ATF7P17544 KLF2P3-201ENST00000451977 1087 ntBASIC18.14■□□□□ 0.49
ATF7P17544 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.14■□□□□ 0.49
ATF7P17544 INGX-202ENST00000489074 768 ntBASIC18.14■□□□□ 0.49
ATF7P17544 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
ATF7P17544 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.14■□□□□ 0.49
ATF7P17544 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.14■□□□□ 0.49
ATF7P17544 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.14■□□□□ 0.49
ATF7P17544 AC138649.4-201ENST00000612222 287 ntBASIC18.14■□□□□ 0.49
ATF7P17544 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.14■□□□□ 0.49
ATF7P17544 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ATF7P17544 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.14■□□□□ 0.49
ATF7P17544 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ATF7P17544 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.14■□□□□ 0.49
ATF7P17544 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ATF7P17544 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ATF7P17544 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.14■□□□□ 0.49
ATF7P17544 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ATF7P17544 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ATF7P17544 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ATF7P17544 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF7P17544 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
ATF7P17544 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATF7P17544 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.13■□□□□ 0.49
ATF7P17544 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATF7P17544 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF7P17544 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ATF7P17544 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.13■□□□□ 0.49
ATF7P17544 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF7P17544 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
ATF7P17544 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF7P17544 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF7P17544 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.13■□□□□ 0.49
ATF7P17544 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.13■□□□□ 0.49
ATF7P17544 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF7P17544 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATF7P17544 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.13■□□□□ 0.49
ATF7P17544 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.13■□□□□ 0.49
ATF7P17544 AC093214.1-201ENST00000511688 1107 ntBASIC18.13■□□□□ 0.49
ATF7P17544 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.13■□□□□ 0.49
ATF7P17544 AP002490.2-201ENST00000524791 560 ntBASIC18.13■□□□□ 0.49
ATF7P17544 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATF7P17544 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ATF7P17544 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.13■□□□□ 0.49
ATF7P17544 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
ATF7P17544 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATF7P17544 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF7P17544 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATF7P17544 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.13■□□□□ 0.49
ATF7P17544 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.13■□□□□ 0.49
ATF7P17544 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATF7P17544 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATF7P17544 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATF7P17544 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms