Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CCDC130P13994 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC130P13994 PCDHA14-201ENST00000506751 2298 ntBASIC17.5■□□□□ 0.39
CCDC130P13994 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC130P13994 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CCDC130P13994 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC130P13994 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC130P13994 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 FAM58DP-201ENST00000428076 619 ntBASIC17.5■□□□□ 0.39
CCDC130P13994 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC130P13994 PRYP6-201ENST00000514804 343 ntBASIC17.5■□□□□ 0.39
CCDC130P13994 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 AC020765.3-201ENST00000613051 740 ntBASIC17.5■□□□□ 0.39
CCDC130P13994 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 AC008267.7-201ENST00000624570 1194 ntBASIC17.5■□□□□ 0.39
CCDC130P13994 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CCDC130P13994 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC130P13994 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC130P13994 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC130P13994 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CCDC130P13994 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC130P13994 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CCDC130P13994 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC130P13994 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC130P13994 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CCDC130P13994 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC130P13994 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC130P13994 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC130P13994 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC130P13994 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC130P13994 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC130P13994 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC130P13994 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC130P13994 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC130P13994 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 AC023141.5-201ENST00000458585 616 ntBASIC17.49■□□□□ 0.39
CCDC130P13994 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC130P13994 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC130P13994 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC130P13994 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC130P13994 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC130P13994 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC130P13994 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC130P13994 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC130P13994 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC130P13994 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC130P13994 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC130P13994 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC130P13994 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC130P13994 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC130P13994 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC130P13994 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC130P13994 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC130P13994 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC130P13994 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC130P13994 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC130P13994 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC130P13994 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC130P13994 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC130P13994 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC130P13994 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC130P13994 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC130P13994 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC130P13994 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC130P13994 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC130P13994 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC130P13994 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC130P13994 KRT18P32-201ENST00000424695 1287 ntBASIC17.48■□□□□ 0.39
CCDC130P13994 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC130P13994 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms