Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 AC006449.6-201ENST00000612330 2296 ntBASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
HNRNPCL4P0DMR1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 AC018712.1-201ENST00000455767 687 ntBASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 EMBP1-201ENST00000458200 901 ntBASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 AC010654.1-201ENST00000615722 808 ntBASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 AC012569.1-201ENST00000591191 1524 ntBASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HNRNPCL4P0DMR1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 KRT18P67-201ENST00000432816 1264 ntBASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 HNRNPDP1-201ENST00000439535 754 ntBASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HNRNPCL4P0DMR1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms