Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 MIR3197-201ENST00000582241 73 ntBASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 LINC00628-201ENST00000628516 1289 ntBASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CCNYL3P0C7X3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 AC012569.1-201ENST00000591191 1524 ntBASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CCNYL3P0C7X3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 AC068418.2-201ENST00000577309 3703 ntBASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 AL355306.1-201ENST00000415580 579 ntBASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 AL592309.1-201ENST00000443127 649 ntBASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 AC006213.4-201ENST00000616184 634 ntBASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CCNYL3P0C7X3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 TFAMP1-201ENST00000412727 736 ntBASIC16■□□□□ 0.15
CCNYL3P0C7X3 FAM86GP-201ENST00000448322 971 ntBASIC16■□□□□ 0.15
CCNYL3P0C7X3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16■□□□□ 0.15
CCNYL3P0C7X3 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CCNYL3P0C7X3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms