Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CD48P09326 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD48P09326 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD48P09326 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD48P09326 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD48P09326 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CD48P09326 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CD48P09326 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD48P09326 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.14■□□□□ 0.33
CD48P09326 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.14■□□□□ 0.33
CD48P09326 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD48P09326 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CD48P09326 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD48P09326 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD48P09326 AC026396.1-201ENST00000419388 421 ntBASIC17.14■□□□□ 0.33
CD48P09326 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.14■□□□□ 0.33
CD48P09326 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.14■□□□□ 0.33
CD48P09326 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.14■□□□□ 0.33
CD48P09326 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD48P09326 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD48P09326 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.14■□□□□ 0.33
CD48P09326 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.14■□□□□ 0.33
CD48P09326 KRT19P2-202ENST00000557173 1012 ntBASIC17.14■□□□□ 0.33
CD48P09326 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
CD48P09326 AC120114.3-201ENST00000611923 658 ntBASIC17.14■□□□□ 0.33
CD48P09326 AC020765.3-201ENST00000613051 740 ntBASIC17.14■□□□□ 0.33
CD48P09326 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.14■□□□□ 0.33
CD48P09326 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CD48P09326 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CD48P09326 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.14■□□□□ 0.33
CD48P09326 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CD48P09326 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
CD48P09326 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.14■□□□□ 0.33
CD48P09326 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.14■□□□□ 0.33
CD48P09326 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.13■□□□□ 0.33
CD48P09326 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
CD48P09326 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.13■□□□□ 0.33
CD48P09326 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CD48P09326 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.13■□□□□ 0.33
CD48P09326 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.13■□□□□ 0.33
CD48P09326 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.13■□□□□ 0.33
CD48P09326 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CD48P09326 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.13■□□□□ 0.33
CD48P09326 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.13■□□□□ 0.33
CD48P09326 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.13■□□□□ 0.33
CD48P09326 BX640515.1-201ENST00000617215 977 ntBASIC17.13■□□□□ 0.33
CD48P09326 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.13■□□□□ 0.33
CD48P09326 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CD48P09326 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CD48P09326 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CD48P09326 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CD48P09326 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CD48P09326 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.13■□□□□ 0.33
CD48P09326 AC024909.3-201ENST00000611513 2257 ntBASIC17.13■□□□□ 0.33
CD48P09326 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CD48P09326 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CD48P09326 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.13■□□□□ 0.33
CD48P09326 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CD48P09326 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.12■□□□□ 0.33
CD48P09326 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CD48P09326 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
CD48P09326 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
CD48P09326 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CD48P09326 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CD48P09326 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.12■□□□□ 0.33
CD48P09326 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.12■□□□□ 0.33
CD48P09326 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CD48P09326 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 PAUPAR-201ENST00000630360 2965 ntBASIC17.12■□□□□ 0.33
CD48P09326 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 AC007950.2-201ENST00000615045 2347 ntBASIC17.12■□□□□ 0.33
CD48P09326 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 PMS2P4-201ENST00000412466 1052 ntBASIC17.12■□□□□ 0.33
CD48P09326 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 POU5F1P6-201ENST00000466990 990 ntBASIC17.12■□□□□ 0.33
CD48P09326 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
CD48P09326 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms