Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.64□□□□□ -0.39
TCRAP04437 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.64□□□□□ -0.39
TCRAP04437 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TCRAP04437 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.64□□□□□ -0.39
TCRAP04437 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 PCGF3-213ENST00000620529 1899 ntBASIC12.64□□□□□ -0.39
TCRAP04437 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.64□□□□□ -0.39
TCRAP04437 KRT18P57-201ENST00000443599 1254 ntBASIC12.64□□□□□ -0.39
TCRAP04437 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.64□□□□□ -0.39
TCRAP04437 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.64□□□□□ -0.39
TCRAP04437 AC012306.2-201ENST00000609350 630 ntBASIC12.64□□□□□ -0.39
TCRAP04437 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TCRAP04437 AC097493.4-201ENST00000641197 219 ntBASIC12.64□□□□□ -0.39
TCRAP04437 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TCRAP04437 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
TCRAP04437 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TCRAP04437 AC112504.1-201ENST00000623415 1841 ntBASIC12.64□□□□□ -0.39
TCRAP04437 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TCRAP04437 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TCRAP04437 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.64□□□□□ -0.39
TCRAP04437 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TCRAP04437 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.64□□□□□ -0.39
TCRAP04437 AL590787.1-201ENST00000568856 1315 ntBASIC12.63□□□□□ -0.39
TCRAP04437 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TCRAP04437 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
TCRAP04437 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 PRAL-201ENST00000624952 3286 ntBASIC12.63□□□□□ -0.39
TCRAP04437 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.63□□□□□ -0.39
TCRAP04437 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.63□□□□□ -0.39
TCRAP04437 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TCRAP04437 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.63□□□□□ -0.39
TCRAP04437 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TCRAP04437 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.63□□□□□ -0.39
TCRAP04437 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TCRAP04437 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.63□□□□□ -0.39
TCRAP04437 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.63□□□□□ -0.39
TCRAP04437 MINOS1P3-201ENST00000457048 203 ntBASIC12.63□□□□□ -0.39
TCRAP04437 AC063952.2-201ENST00000498792 1227 ntBASIC12.63□□□□□ -0.39
TCRAP04437 DET1-205ENST00000558413 583 ntTSL 4 BASIC12.63□□□□□ -0.39
TCRAP04437 NTF6B-201ENST00000591913 560 ntBASIC12.63□□□□□ -0.39
TCRAP04437 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.63□□□□□ -0.39
TCRAP04437 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.63□□□□□ -0.39
TCRAP04437 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
TCRAP04437 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.63□□□□□ -0.39
TCRAP04437 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.63□□□□□ -0.39
TCRAP04437 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.63□□□□□ -0.39
TCRAP04437 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TCRAP04437 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TCRAP04437 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
TCRAP04437 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TCRAP04437 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TCRAP04437 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TCRAP04437 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TCRAP04437 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.62□□□□□ -0.39
TCRAP04437 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TCRAP04437 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms