Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMNAP02545 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LMNAP02545 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMNAP02545 PTCHD3P3-201ENST00000403073 906 ntBASIC17.36■□□□□ 0.37
LMNAP02545 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
LMNAP02545 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.36■□□□□ 0.37
LMNAP02545 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LMNAP02545 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LMNAP02545 CXCL1P1-201ENST00000502804 216 ntBASIC17.36■□□□□ 0.37
LMNAP02545 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.36■□□□□ 0.37
LMNAP02545 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.36■□□□□ 0.37
LMNAP02545 SLC25A39P2-201ENST00000537614 270 ntBASIC17.36■□□□□ 0.37
LMNAP02545 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.36■□□□□ 0.37
LMNAP02545 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.36■□□□□ 0.37
LMNAP02545 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.36■□□□□ 0.37
LMNAP02545 AC026120.1-201ENST00000611536 926 ntBASIC17.36■□□□□ 0.37
LMNAP02545 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMNAP02545 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LMNAP02545 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LMNAP02545 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMNAP02545 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LMNAP02545 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.36■□□□□ 0.37
LMNAP02545 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMNAP02545 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LMNAP02545 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LMNAP02545 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LMNAP02545 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LMNAP02545 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LMNAP02545 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LMNAP02545 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LMNAP02545 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LMNAP02545 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LMNAP02545 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
LMNAP02545 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.35■□□□□ 0.37
LMNAP02545 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LMNAP02545 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.35■□□□□ 0.37
LMNAP02545 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.35■□□□□ 0.37
LMNAP02545 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 AC125807.1-201ENST00000483097 614 ntBASIC17.35■□□□□ 0.37
LMNAP02545 FAM86C2P-203ENST00000528684 1004 ntBASIC17.35■□□□□ 0.37
LMNAP02545 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.35■□□□□ 0.37
LMNAP02545 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 MIR6799-201ENST00000620297 69 ntBASIC17.35■□□□□ 0.37
LMNAP02545 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.35■□□□□ 0.37
LMNAP02545 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.35■□□□□ 0.37
LMNAP02545 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.35■□□□□ 0.37
LMNAP02545 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LMNAP02545 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.35■□□□□ 0.37
LMNAP02545 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LMNAP02545 AC148477.5-201ENST00000625164 1645 ntBASIC17.35■□□□□ 0.37
LMNAP02545 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LMNAP02545 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 PCDHB17P-201ENST00000539533 2393 ntBASIC17.35■□□□□ 0.37
LMNAP02545 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
LMNAP02545 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.35■□□□□ 0.37
LMNAP02545 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LMNAP02545 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LMNAP02545 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.34■□□□□ 0.37
LMNAP02545 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LMNAP02545 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMNAP02545 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMNAP02545 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.34■□□□□ 0.37
LMNAP02545 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMNAP02545 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
LMNAP02545 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LMNAP02545 ADH5P3-201ENST00000433842 1137 ntBASIC17.34■□□□□ 0.37
LMNAP02545 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.34■□□□□ 0.37
LMNAP02545 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.34■□□□□ 0.37
LMNAP02545 LINC02199-201ENST00000506655 2702 ntBASIC17.34■□□□□ 0.37
LMNAP02545 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LMNAP02545 IGHV3-42-201ENST00000520410 361 ntBASIC17.34■□□□□ 0.37
LMNAP02545 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LMNAP02545 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.34■□□□□ 0.37
LMNAP02545 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMNAP02545 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LMNAP02545 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LMNAP02545 AC025048.6-201ENST00000634326 1161 ntBASIC17.34■□□□□ 0.37
LMNAP02545 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMNAP02545 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LMNAP02545 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMNAP02545 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LMNAP02545 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms