Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MBD3O95983 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC19■□□□□ 0.63
MBD3O95983 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19■□□□□ 0.63
MBD3O95983 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19■□□□□ 0.63
MBD3O95983 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MBD3O95983 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19■□□□□ 0.63
MBD3O95983 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19■□□□□ 0.63
MBD3O95983 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
MBD3O95983 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19■□□□□ 0.63
MBD3O95983 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19■□□□□ 0.63
MBD3O95983 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MBD3O95983 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC19■□□□□ 0.63
MBD3O95983 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MBD3O95983 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19■□□□□ 0.63
MBD3O95983 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19■□□□□ 0.63
MBD3O95983 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19■□□□□ 0.63
MBD3O95983 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MBD3O95983 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19■□□□□ 0.63
MBD3O95983 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3O95983 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3O95983 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD3O95983 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.99■□□□□ 0.63
MBD3O95983 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
MBD3O95983 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MBD3O95983 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3O95983 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3O95983 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3O95983 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3O95983 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3O95983 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MBD3O95983 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
MBD3O95983 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.99■□□□□ 0.63
MBD3O95983 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
MBD3O95983 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.99■□□□□ 0.63
MBD3O95983 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.99■□□□□ 0.63
MBD3O95983 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.99■□□□□ 0.63
MBD3O95983 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.99■□□□□ 0.63
MBD3O95983 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD3O95983 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD3O95983 AC006011.2-201ENST00000621313 1158 ntBASIC18.99■□□□□ 0.63
MBD3O95983 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3O95983 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
MBD3O95983 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3O95983 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
MBD3O95983 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD3O95983 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3O95983 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MBD3O95983 SSR4P1-203ENST00000599569 2260 ntBASIC18.99■□□□□ 0.63
MBD3O95983 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3O95983 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3O95983 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.99■□□□□ 0.63
MBD3O95983 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.99■□□□□ 0.63
MBD3O95983 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.98■□□□□ 0.63
MBD3O95983 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
MBD3O95983 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
MBD3O95983 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.98■□□□□ 0.63
MBD3O95983 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
MBD3O95983 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
MBD3O95983 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.98■□□□□ 0.63
MBD3O95983 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.98■□□□□ 0.63
MBD3O95983 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MBD3O95983 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.98■□□□□ 0.63
MBD3O95983 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.98■□□□□ 0.63
MBD3O95983 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
MBD3O95983 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms