Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.27■□□□□ 0.19
CPNE6O95741 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.27■□□□□ 0.19
CPNE6O95741 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE6O95741 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CPNE6O95741 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE6O95741 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE6O95741 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CPNE6O95741 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE6O95741 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.26■□□□□ 0.19
CPNE6O95741 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE6O95741 AC067863.1-201ENST00000494933 530 ntBASIC16.26■□□□□ 0.19
CPNE6O95741 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE6O95741 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE6O95741 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 DUX4L17-201ENST00000557360 1267 ntBASIC16.26■□□□□ 0.19
CPNE6O95741 AC243562.1-201ENST00000560672 389 ntBASIC16.26■□□□□ 0.19
CPNE6O95741 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.26■□□□□ 0.19
CPNE6O95741 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE6O95741 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE6O95741 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CPNE6O95741 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE6O95741 CYP2T1P-202ENST00000641596 2535 ntBASIC16.25■□□□□ 0.19
CPNE6O95741 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE6O95741 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE6O95741 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CPNE6O95741 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CPNE6O95741 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 KRT18P32-201ENST00000424695 1287 ntBASIC16.25■□□□□ 0.19
CPNE6O95741 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.25■□□□□ 0.19
CPNE6O95741 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 AC109635.5-201ENST00000533593 962 ntBASIC16.25■□□□□ 0.19
CPNE6O95741 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE6O95741 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.25■□□□□ 0.19
CPNE6O95741 SPCS2P1-201ENST00000561636 679 ntBASIC16.25■□□□□ 0.19
CPNE6O95741 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.25■□□□□ 0.19
CPNE6O95741 AC091167.2-201ENST00000579581 588 ntBASIC16.25■□□□□ 0.19
CPNE6O95741 AC015911.4-201ENST00000588022 1070 ntBASIC16.25■□□□□ 0.19
CPNE6O95741 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE6O95741 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.25■□□□□ 0.19
CPNE6O95741 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
CPNE6O95741 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CPNE6O95741 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CPNE6O95741 TOP3BP1-201ENST00000420768 1380 ntBASIC16.25■□□□□ 0.19
CPNE6O95741 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.25■□□□□ 0.19
CPNE6O95741 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE6O95741 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CPNE6O95741 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CPNE6O95741 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.24■□□□□ 0.19
CPNE6O95741 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms