Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.9□□□□□ -0.18
SIX6O95475 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SIX6O95475 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SIX6O95475 AL671710.1-201ENST00000610245 2349 ntBASIC13.9□□□□□ -0.18
SIX6O95475 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.9□□□□□ -0.18
SIX6O95475 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
SIX6O95475 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.9□□□□□ -0.19
SIX6O95475 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.9□□□□□ -0.19
SIX6O95475 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.89□□□□□ -0.19
SIX6O95475 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SIX6O95475 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
SIX6O95475 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.89□□□□□ -0.19
SIX6O95475 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.89□□□□□ -0.19
SIX6O95475 AC016027.1-202ENST00000607927 1699 ntBASIC13.89□□□□□ -0.19
SIX6O95475 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.89□□□□□ -0.19
SIX6O95475 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SIX6O95475 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.89□□□□□ -0.19
SIX6O95475 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SIX6O95475 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.89□□□□□ -0.19
SIX6O95475 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.89□□□□□ -0.19
SIX6O95475 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.89□□□□□ -0.19
SIX6O95475 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.89□□□□□ -0.19
SIX6O95475 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.89□□□□□ -0.19
SIX6O95475 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SIX6O95475 DUX4L17-201ENST00000557360 1267 ntBASIC13.89□□□□□ -0.19
SIX6O95475 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.89□□□□□ -0.19
SIX6O95475 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.89□□□□□ -0.19
SIX6O95475 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.89□□□□□ -0.19
SIX6O95475 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.89□□□□□ -0.19
SIX6O95475 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
SIX6O95475 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.89□□□□□ -0.19
SIX6O95475 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SIX6O95475 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.88□□□□□ -0.19
SIX6O95475 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 AL049757.1-201ENST00000616842 1596 ntBASIC13.88□□□□□ -0.19
SIX6O95475 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.88□□□□□ -0.19
SIX6O95475 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.88□□□□□ -0.19
SIX6O95475 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SIX6O95475 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.88□□□□□ -0.19
SIX6O95475 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.88□□□□□ -0.19
SIX6O95475 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 PCDHA3-202ENST00000532566 4594 ntBASIC13.88□□□□□ -0.19
SIX6O95475 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SIX6O95475 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
SIX6O95475 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SIX6O95475 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.88□□□□□ -0.19
SIX6O95475 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.88□□□□□ -0.19
SIX6O95475 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.88□□□□□ -0.19
SIX6O95475 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.88□□□□□ -0.19
SIX6O95475 AC111152.3-201ENST00000569699 673 ntBASIC13.88□□□□□ -0.19
SIX6O95475 STK25P1-201ENST00000585406 838 ntBASIC13.88□□□□□ -0.19
SIX6O95475 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SIX6O95475 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms