Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ARSEP1-201ENST00000420443 635 ntBASIC17.74■□□□□ 0.43
CSPG5O95196 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.74■□□□□ 0.43
CSPG5O95196 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.74■□□□□ 0.43
CSPG5O95196 AC105233.2-201ENST00000523697 349 ntBASIC17.74■□□□□ 0.43
CSPG5O95196 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.74■□□□□ 0.43
CSPG5O95196 AF228730.5-201ENST00000530288 346 ntBASIC17.74■□□□□ 0.43
CSPG5O95196 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG5O95196 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.74■□□□□ 0.43
CSPG5O95196 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.74■□□□□ 0.43
CSPG5O95196 AC010336.2-201ENST00000564226 506 ntBASIC17.74■□□□□ 0.43
CSPG5O95196 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
CSPG5O95196 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG5O95196 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CSPG5O95196 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG5O95196 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.74■□□□□ 0.43
CSPG5O95196 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG5O95196 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CSPG5O95196 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG5O95196 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG5O95196 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CSPG5O95196 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CSPG5O95196 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG5O95196 AC138969.3-201ENST00000546612 1459 ntBASIC17.74■□□□□ 0.43
CSPG5O95196 AC138932.2-201ENST00000548268 1459 ntBASIC17.74■□□□□ 0.43
CSPG5O95196 AC126755.4-201ENST00000549796 1459 ntBASIC17.74■□□□□ 0.43
CSPG5O95196 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.74■□□□□ 0.43
CSPG5O95196 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CSPG5O95196 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG5O95196 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG5O95196 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.74■□□□□ 0.43
CSPG5O95196 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG5O95196 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG5O95196 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSPG5O95196 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.73■□□□□ 0.43
CSPG5O95196 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.73■□□□□ 0.43
CSPG5O95196 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CSPG5O95196 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.73■□□□□ 0.43
CSPG5O95196 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.73■□□□□ 0.43
CSPG5O95196 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CSPG5O95196 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.73■□□□□ 0.43
CSPG5O95196 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.73■□□□□ 0.43
CSPG5O95196 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.73■□□□□ 0.43
CSPG5O95196 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.73■□□□□ 0.43
CSPG5O95196 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.73■□□□□ 0.43
CSPG5O95196 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 KRT18P34-201ENST00000488218 1270 ntBASIC17.73■□□□□ 0.43
CSPG5O95196 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.73■□□□□ 0.43
CSPG5O95196 AL589739.1-201ENST00000607720 493 ntBASIC17.73■□□□□ 0.43
CSPG5O95196 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.73■□□□□ 0.43
CSPG5O95196 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CSPG5O95196 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CSPG5O95196 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CSPG5O95196 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CSPG5O95196 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.73■□□□□ 0.43
CSPG5O95196 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.73■□□□□ 0.43
CSPG5O95196 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CSPG5O95196 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.72■□□□□ 0.43
CSPG5O95196 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG5O95196 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG5O95196 AC093525.9-201ENST00000624961 1746 ntBASIC17.72■□□□□ 0.43
CSPG5O95196 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.72■□□□□ 0.43
CSPG5O95196 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG5O95196 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG5O95196 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG5O95196 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CSPG5O95196 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.72■□□□□ 0.43
CSPG5O95196 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.72■□□□□ 0.43
CSPG5O95196 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG5O95196 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CSPG5O95196 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG5O95196 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG5O95196 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG5O95196 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CSPG5O95196 GPR53P-205ENST00000457298 1084 ntBASIC17.72■□□□□ 0.43
CSPG5O95196 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.72■□□□□ 0.43
CSPG5O95196 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.72■□□□□ 0.43
CSPG5O95196 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.72■□□□□ 0.43
CSPG5O95196 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.72■□□□□ 0.43
CSPG5O95196 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.72■□□□□ 0.43
CSPG5O95196 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.72■□□□□ 0.43
CSPG5O95196 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSPG5O95196 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.72■□□□□ 0.43
CSPG5O95196 FLJ16779-201ENST00000612722 7638 ntBASIC17.72■□□□□ 0.43
CSPG5O95196 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CSPG5O95196 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms