Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 TK2-221ENST00000620035 5060 ntTSL 2 BASIC18.39■□□□□ 0.53
CLSTN1O94985 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CLSTN1O94985 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLSTN1O94985 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLSTN1O94985 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLSTN1O94985 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.39■□□□□ 0.53
CLSTN1O94985 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.39■□□□□ 0.53
CLSTN1O94985 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.39■□□□□ 0.53
CLSTN1O94985 AP002414.1-201ENST00000391405 1147 ntBASIC18.39■□□□□ 0.53
CLSTN1O94985 KRT18P27-201ENST00000427733 1299 ntBASIC18.39■□□□□ 0.53
CLSTN1O94985 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.39■□□□□ 0.53
CLSTN1O94985 FDX1P1-201ENST00000449115 551 ntBASIC18.39■□□□□ 0.53
CLSTN1O94985 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.39■□□□□ 0.53
CLSTN1O94985 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.39■□□□□ 0.53
CLSTN1O94985 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.39■□□□□ 0.53
CLSTN1O94985 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.39■□□□□ 0.53
CLSTN1O94985 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.39■□□□□ 0.53
CLSTN1O94985 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.39■□□□□ 0.53
CLSTN1O94985 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLSTN1O94985 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.39■□□□□ 0.53
CLSTN1O94985 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CLSTN1O94985 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.39■□□□□ 0.53
CLSTN1O94985 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.53
CLSTN1O94985 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLSTN1O94985 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CLSTN1O94985 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLSTN1O94985 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLSTN1O94985 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLSTN1O94985 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.39■□□□□ 0.53
CLSTN1O94985 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLSTN1O94985 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.39■□□□□ 0.53
CLSTN1O94985 AC005915.1-201ENST00000624912 2018 ntBASIC18.39■□□□□ 0.53
CLSTN1O94985 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLSTN1O94985 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLSTN1O94985 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLSTN1O94985 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLSTN1O94985 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLSTN1O94985 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 AC073621.1-201ENST00000392730 636 ntBASIC18.38■□□□□ 0.53
CLSTN1O94985 AC108073.2-201ENST00000464002 357 ntBASIC18.38■□□□□ 0.53
CLSTN1O94985 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CLSTN1O94985 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.38■□□□□ 0.53
CLSTN1O94985 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.38■□□□□ 0.53
CLSTN1O94985 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.38■□□□□ 0.53
CLSTN1O94985 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.38■□□□□ 0.53
CLSTN1O94985 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 IL9RP2-201ENST00000423948 1312 ntBASIC18.38■□□□□ 0.53
CLSTN1O94985 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLSTN1O94985 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLSTN1O94985 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLSTN1O94985 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.38■□□□□ 0.53
CLSTN1O94985 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 AC104109.2-201ENST00000602919 1418 ntBASIC18.38■□□□□ 0.53
CLSTN1O94985 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CLSTN1O94985 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLSTN1O94985 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLSTN1O94985 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
CLSTN1O94985 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLSTN1O94985 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.38■□□□□ 0.53
CLSTN1O94985 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
CLSTN1O94985 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CLSTN1O94985 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CLSTN1O94985 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.37■□□□□ 0.53
CLSTN1O94985 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.37■□□□□ 0.53
CLSTN1O94985 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CLSTN1O94985 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CLSTN1O94985 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.37■□□□□ 0.53
CLSTN1O94985 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CLSTN1O94985 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLSTN1O94985 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLSTN1O94985 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.37■□□□□ 0.53
CLSTN1O94985 GGTLC5P-201ENST00000617623 998 ntBASIC18.37■□□□□ 0.53
CLSTN1O94985 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLSTN1O94985 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLSTN1O94985 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CLSTN1O94985 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CLSTN1O94985 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLSTN1O94985 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms