Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.49■□□□□ 0.23
SUPT3HO75486 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.49■□□□□ 0.23
SUPT3HO75486 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.49■□□□□ 0.23
SUPT3HO75486 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.49■□□□□ 0.23
SUPT3HO75486 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SUPT3HO75486 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SUPT3HO75486 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.49■□□□□ 0.23
SUPT3HO75486 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SUPT3HO75486 AF238378.1-201ENST00000526806 358 ntBASIC16.49■□□□□ 0.23
SUPT3HO75486 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.49■□□□□ 0.23
SUPT3HO75486 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.49■□□□□ 0.23
SUPT3HO75486 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
SUPT3HO75486 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SUPT3HO75486 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.49■□□□□ 0.23
SUPT3HO75486 IFNL4P1-201ENST00000607083 540 ntBASIC16.49■□□□□ 0.23
SUPT3HO75486 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.49■□□□□ 0.23
SUPT3HO75486 AC068587.6-202ENST00000641839 5619 ntBASIC16.49■□□□□ 0.23
SUPT3HO75486 AF228730.7-201ENST00000641842 219 ntBASIC16.49■□□□□ 0.23
SUPT3HO75486 AL139011.1-202ENST00000642063 584 ntBASIC16.49■□□□□ 0.23
SUPT3HO75486 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
SUPT3HO75486 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.49■□□□□ 0.23
SUPT3HO75486 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.49■□□□□ 0.23
SUPT3HO75486 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.49■□□□□ 0.23
SUPT3HO75486 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.49■□□□□ 0.23
SUPT3HO75486 AL365209.1-201ENST00000624418 6473 ntBASIC16.49■□□□□ 0.23
SUPT3HO75486 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SUPT3HO75486 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SUPT3HO75486 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.48■□□□□ 0.23
SUPT3HO75486 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SUPT3HO75486 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SUPT3HO75486 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SUPT3HO75486 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SUPT3HO75486 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.48■□□□□ 0.23
SUPT3HO75486 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.48■□□□□ 0.23
SUPT3HO75486 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.48■□□□□ 0.23
SUPT3HO75486 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SUPT3HO75486 LAGE3P1-201ENST00000425356 484 ntBASIC16.48■□□□□ 0.23
SUPT3HO75486 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.48■□□□□ 0.23
SUPT3HO75486 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.48■□□□□ 0.23
SUPT3HO75486 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.48■□□□□ 0.23
SUPT3HO75486 AC006557.2-201ENST00000592985 1240 ntBASIC16.48■□□□□ 0.23
SUPT3HO75486 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SUPT3HO75486 CLEC4GP1-201ENST00000596555 870 ntBASIC16.48■□□□□ 0.23
SUPT3HO75486 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.48■□□□□ 0.23
SUPT3HO75486 AL805961.1-202ENST00000641562 540 ntBASIC16.48■□□□□ 0.23
SUPT3HO75486 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SUPT3HO75486 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.48■□□□□ 0.23
SUPT3HO75486 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SUPT3HO75486 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SUPT3HO75486 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SUPT3HO75486 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SUPT3HO75486 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SUPT3HO75486 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SUPT3HO75486 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.48■□□□□ 0.23
SUPT3HO75486 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SUPT3HO75486 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SUPT3HO75486 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SUPT3HO75486 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SUPT3HO75486 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SUPT3HO75486 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.47■□□□□ 0.23
SUPT3HO75486 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SUPT3HO75486 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.47■□□□□ 0.23
SUPT3HO75486 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.47■□□□□ 0.23
SUPT3HO75486 AC026691.1-201ENST00000602502 2017 ntBASIC16.47■□□□□ 0.23
SUPT3HO75486 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.47■□□□□ 0.23
SUPT3HO75486 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SUPT3HO75486 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
SUPT3HO75486 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SUPT3HO75486 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.47■□□□□ 0.23
SUPT3HO75486 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.47■□□□□ 0.23
SUPT3HO75486 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.47■□□□□ 0.23
SUPT3HO75486 MPDU1-223ENST00000582151 728 ntBASIC16.47■□□□□ 0.23
SUPT3HO75486 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.47■□□□□ 0.23
SUPT3HO75486 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SUPT3HO75486 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms