Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.39□□□□□ -0.59
NDUFA1O15239 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.39□□□□□ -0.59
NDUFA1O15239 AC010491.1-201ENST00000563101 2797 ntBASIC11.39□□□□□ -0.59
NDUFA1O15239 AC073347.1-201ENST00000421633 2643 ntBASIC11.39□□□□□ -0.59
NDUFA1O15239 SLC9A7P1-201ENST00000554295 3311 ntBASIC11.38□□□□□ -0.59
NDUFA1O15239 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC11.38□□□□□ -0.59
NDUFA1O15239 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 AL353593.2-201ENST00000602529 1483 ntBASIC11.38□□□□□ -0.59
NDUFA1O15239 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
NDUFA1O15239 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
NDUFA1O15239 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.38□□□□□ -0.59
NDUFA1O15239 GGT4P-201ENST00000623672 1708 ntBASIC11.38□□□□□ -0.59
NDUFA1O15239 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.38□□□□□ -0.59
NDUFA1O15239 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
NDUFA1O15239 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
NDUFA1O15239 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.38□□□□□ -0.59
NDUFA1O15239 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.38□□□□□ -0.59
NDUFA1O15239 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
NDUFA1O15239 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
NDUFA1O15239 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.38□□□□□ -0.59
NDUFA1O15239 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.38□□□□□ -0.59
NDUFA1O15239 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC11.38□□□□□ -0.59
NDUFA1O15239 AL136038.3-201ENST00000561909 1096 ntBASIC11.38□□□□□ -0.59
NDUFA1O15239 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.38□□□□□ -0.59
NDUFA1O15239 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC11.38□□□□□ -0.59
NDUFA1O15239 AC005336.2-201ENST00000593183 939 ntBASIC11.38□□□□□ -0.59
NDUFA1O15239 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.38□□□□□ -0.59
NDUFA1O15239 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC11.38□□□□□ -0.59
NDUFA1O15239 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.38□□□□□ -0.59
NDUFA1O15239 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC11.38□□□□□ -0.59
NDUFA1O15239 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.38□□□□□ -0.59
NDUFA1O15239 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.38□□□□□ -0.59
NDUFA1O15239 AC006449.6-201ENST00000612330 2296 ntBASIC11.38□□□□□ -0.59
NDUFA1O15239 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
NDUFA1O15239 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11.38□□□□□ -0.59
NDUFA1O15239 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
NDUFA1O15239 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
NDUFA1O15239 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
NDUFA1O15239 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
NDUFA1O15239 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC11.37□□□□□ -0.59
NDUFA1O15239 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.37□□□□□ -0.59
NDUFA1O15239 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.37□□□□□ -0.59
NDUFA1O15239 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC11.37□□□□□ -0.59
NDUFA1O15239 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC11.37□□□□□ -0.59
NDUFA1O15239 CHCHD2P8-201ENST00000429873 447 ntBASIC11.37□□□□□ -0.59
NDUFA1O15239 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
NDUFA1O15239 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.37□□□□□ -0.59
NDUFA1O15239 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
NDUFA1O15239 Z69720.1-201ENST00000601483 472 ntBASIC11.37□□□□□ -0.59
NDUFA1O15239 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.37□□□□□ -0.59
NDUFA1O15239 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms