Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM38O00635 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM38O00635 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM38O00635 AL139327.4-201ENST00000612362 153 ntBASIC16.69■□□□□ 0.26
TRIM38O00635 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM38O00635 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM38O00635 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM38O00635 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM38O00635 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM38O00635 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM38O00635 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM38O00635 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM38O00635 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
TRIM38O00635 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 AC092068.3-201ENST00000587894 2016 ntBASIC16.69■□□□□ 0.26
TRIM38O00635 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRIM38O00635 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRIM38O00635 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM38O00635 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TRIM38O00635 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM38O00635 SLC25A1P3-201ENST00000395415 828 ntBASIC16.68■□□□□ 0.26
TRIM38O00635 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 AC023141.5-201ENST00000458585 616 ntBASIC16.68■□□□□ 0.26
TRIM38O00635 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM38O00635 SPCS2P1-201ENST00000561636 679 ntBASIC16.68■□□□□ 0.26
TRIM38O00635 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM38O00635 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 AC092053.1-201ENST00000605787 1936 ntBASIC16.68■□□□□ 0.26
TRIM38O00635 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM38O00635 AC129492.6-201ENST00000611383 1305 ntBASIC16.68■□□□□ 0.26
TRIM38O00635 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM38O00635 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM38O00635 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM38O00635 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM38O00635 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM38O00635 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM38O00635 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRIM38O00635 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM38O00635 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 TIMM8BP1-201ENST00000452384 211 ntBASIC16.67■□□□□ 0.26
TRIM38O00635 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM38O00635 AC025678.2-201ENST00000562061 970 ntBASIC16.67■□□□□ 0.26
TRIM38O00635 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.67■□□□□ 0.26
TRIM38O00635 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM38O00635 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 LINC00628-201ENST00000628516 1289 ntBASIC16.67■□□□□ 0.26
TRIM38O00635 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM38O00635 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM38O00635 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM38O00635 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TRIM38O00635 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM38O00635 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM38O00635 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM38O00635 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRIM38O00635 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM38O00635 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM38O00635 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM38O00635 AC002056.1-201ENST00000395613 760 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms