Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXN3O00409 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXN3O00409 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
FOXN3O00409 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
FOXN3O00409 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXN3O00409 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
FOXN3O00409 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.71■□□□□ 0.43
FOXN3O00409 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FOXN3O00409 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXN3O00409 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.71■□□□□ 0.43
FOXN3O00409 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXN3O00409 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXN3O00409 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
FOXN3O00409 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXN3O00409 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXN3O00409 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXN3O00409 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXN3O00409 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.71■□□□□ 0.43
FOXN3O00409 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
FOXN3O00409 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FOXN3O00409 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.71■□□□□ 0.43
FOXN3O00409 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
FOXN3O00409 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
FOXN3O00409 BCAR1-209ENST00000546196 1340 ntBASIC17.71■□□□□ 0.42
FOXN3O00409 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXN3O00409 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXN3O00409 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXN3O00409 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXN3O00409 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXN3O00409 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXN3O00409 AC008894.3-201ENST00000624324 3103 ntBASIC17.7■□□□□ 0.42
FOXN3O00409 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXN3O00409 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXN3O00409 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXN3O00409 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXN3O00409 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
FOXN3O00409 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
FOXN3O00409 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.7■□□□□ 0.42
FOXN3O00409 SLC25A1P1-201ENST00000528351 927 ntBASIC17.7■□□□□ 0.42
FOXN3O00409 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.7■□□□□ 0.42
FOXN3O00409 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.7■□□□□ 0.42
FOXN3O00409 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.7■□□□□ 0.42
FOXN3O00409 AL009183.1-201ENST00000603760 355 ntBASIC17.7■□□□□ 0.42
FOXN3O00409 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXN3O00409 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
FOXN3O00409 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXN3O00409 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXN3O00409 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXN3O00409 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXN3O00409 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXN3O00409 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FOXN3O00409 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
FOXN3O00409 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
FOXN3O00409 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
FOXN3O00409 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FOXN3O00409 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXN3O00409 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXN3O00409 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXN3O00409 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.7■□□□□ 0.42
FOXN3O00409 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.7■□□□□ 0.42
FOXN3O00409 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FOXN3O00409 CROCCP1-201ENST00000426910 5675 ntBASIC17.7■□□□□ 0.42
FOXN3O00409 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXN3O00409 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
FOXN3O00409 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXN3O00409 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
FOXN3O00409 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXN3O00409 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
FOXN3O00409 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXN3O00409 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FOXN3O00409 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXN3O00409 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXN3O00409 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXN3O00409 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXN3O00409 AC092474.2-201ENST00000424288 719 ntBASIC17.69■□□□□ 0.42
FOXN3O00409 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXN3O00409 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXN3O00409 KRT19P2-202ENST00000557173 1012 ntBASIC17.69■□□□□ 0.42
FOXN3O00409 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
FOXN3O00409 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.69■□□□□ 0.42
FOXN3O00409 BX640515.1-201ENST00000617215 977 ntBASIC17.69■□□□□ 0.42
FOXN3O00409 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXN3O00409 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXN3O00409 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXN3O00409 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
FOXN3O00409 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FOXN3O00409 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.69■□□□□ 0.42
FOXN3O00409 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.69■□□□□ 0.42
FOXN3O00409 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXN3O00409 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
FOXN3O00409 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXN3O00409 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
FOXN3O00409 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.68■□□□□ 0.42
FOXN3O00409 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXN3O00409 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FOXN3O00409 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.68■□□□□ 0.42
FOXN3O00409 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXN3O00409 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FOXN3O00409 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
FOXN3O00409 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms