Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 MIR4515-201ENST00000584082 81 ntBASIC12.43□□□□□ -0.42
KNCNA6PVL3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 AC023141.13-201ENST00000604991 943 ntBASIC12.43□□□□□ -0.42
KNCNA6PVL3 AC007064.4-201ENST00000637740 555 ntBASIC12.43□□□□□ -0.42
KNCNA6PVL3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 AC011270.2-201ENST00000624293 2550 ntBASIC12.43□□□□□ -0.42
KNCNA6PVL3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 AC025580.3-201ENST00000617932 1424 ntBASIC12.43□□□□□ -0.42
KNCNA6PVL3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 AC006538.1-201ENST00000567905 1585 ntBASIC12.43□□□□□ -0.42
KNCNA6PVL3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
KNCNA6PVL3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
KNCNA6PVL3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 NORAD-201ENST00000565493 5339 ntBASIC12.42□□□□□ -0.42
KNCNA6PVL3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 AP000347.1-202ENST00000435868 847 ntBASIC12.42□□□□□ -0.42
KNCNA6PVL3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 POLD2P1-201ENST00000511220 997 ntBASIC12.42□□□□□ -0.42
KNCNA6PVL3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 SNX33P1-201ENST00000592116 1762 ntBASIC12.42□□□□□ -0.42
KNCNA6PVL3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
KNCNA6PVL3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.42□□□□□ -0.42
KNCNA6PVL3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
KNCNA6PVL3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.41□□□□□ -0.42
KNCNA6PVL3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
KNCNA6PVL3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
KNCNA6PVL3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms