Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ACTG1P14-201ENST00000446382 1122 ntBASIC15.71■□□□□ 0.11
LRIT2A6NDA9 DNAJB3-201ENST00000446806 729 ntBASIC15.71■□□□□ 0.11
LRIT2A6NDA9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LRIT2A6NDA9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRIT2A6NDA9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRIT2A6NDA9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LRIT2A6NDA9 AC005622.1-201ENST00000636801 1703 ntBASIC15.71■□□□□ 0.1
LRIT2A6NDA9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.71■□□□□ 0.1
LRIT2A6NDA9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRIT2A6NDA9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LRIT2A6NDA9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 FAM86C2P-203ENST00000528684 1004 ntBASIC15.7■□□□□ 0.1
LRIT2A6NDA9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.7■□□□□ 0.1
LRIT2A6NDA9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.7■□□□□ 0.1
LRIT2A6NDA9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 TFAMP1-201ENST00000412727 736 ntBASIC15.69■□□□□ 0.1
LRIT2A6NDA9 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 ADH5P3-201ENST00000433842 1137 ntBASIC15.69■□□□□ 0.1
LRIT2A6NDA9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 ALG1L5P-201ENST00000482043 771 ntBASIC15.69■□□□□ 0.1
LRIT2A6NDA9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 AC005829.1-201ENST00000570002 483 ntBASIC15.69■□□□□ 0.1
LRIT2A6NDA9 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 AC073439.1-201ENST00000624121 1774 ntBASIC15.69■□□□□ 0.1
LRIT2A6NDA9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
LRIT2A6NDA9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms