Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 HCG4-201ENST00000418983 998 ntBASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 RPS15P9-201ENST00000494093 319 ntBASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 AC107918.4-202ENST00000641623 219 ntBASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 AC129492.6-201ENST00000611383 1305 ntBASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV9S1A1TA0A576 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 AKR1C7P-201ENST00000305623 895 ntBASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 ARMC10P1-201ENST00000313754 855 ntBASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 KRT18P27-201ENST00000427733 1299 ntBASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 AC020765.3-201ENST00000613051 740 ntBASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV9S1A1TA0A576 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 AC126177.1-201ENST00000547829 2218 ntBASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.66■□□□□ 0.26
TCRBV9S1A1TA0A576 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms