Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 FAM185BP-201ENST00000443595 716 ntBASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 AC005593.1-201ENST00000624894 515 ntBASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 LINC02447-202ENST00000501888 2146 ntBASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 AC005622.1-201ENST00000636801 1703 ntBASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 HMGA1P7-201ENST00000406908 502 ntBASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 AC020765.3-201ENST00000613051 740 ntBASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 AL596257.1-201ENST00000641463 2694 ntBASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV7S3A2A0A539 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 AF186996.4-201ENST00000467186 377 ntBASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TCRBV7S3A2A0A539 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms