Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 PCDH8P1-201ENST00000428983 2773 ntBASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC138932.1-201ENST00000534164 6830 ntBASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV5-4A0A0C4DH59 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC069335.1-201ENST00000489972 472 ntBASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC098859.1-201ENST00000502915 1238 ntBASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 AL365330.1-201ENST00000607459 531 ntBASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TRBV5-4A0A0C4DH59 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRBV5-4A0A0C4DH59 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TRBV5-4A0A0C4DH59 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC026691.1-201ENST00000602502 2017 ntBASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 AC004461.1-201ENST00000412461 403 ntBASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 AL592309.1-201ENST00000443127 649 ntBASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 AP000344.2-201ENST00000512987 629 ntBASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.2■□□□□ 0.18
TRBV5-4A0A0C4DH59 SPTSSB-204ENST00000617024 1292 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms