Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
DDX49Q9Y6V7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 RPS8P6-201ENST00000426177 609 ntBASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 AC064836.3-201ENST00000607928 673 ntBASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
DDX49Q9Y6V7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 UPF3AP3-201ENST00000420996 769 ntBASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 AL020989.1-201ENST00000422979 469 ntBASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 AC103564.2-201ENST00000432853 1299 ntBASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 AL591424.1-201ENST00000442569 1213 ntBASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 PRYP5-201ENST00000451909 266 ntBASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
DDX49Q9Y6V7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 AC136632.2-201ENST00000512891 861 ntBASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 AC004706.3-202ENST00000621574 984 ntBASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms