Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 AL645728.1-201ENST00000366221 2101 ntBASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB11Q9Y5F2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 AC244107.1-201ENST00000442033 332 ntBASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 TIMM8BP1-201ENST00000452384 211 ntBASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHB11Q9Y5F2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 CYP2A7P1-201ENST00000595391 815 ntBASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHB11Q9Y5F2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB11Q9Y5F2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
PCDHB11Q9Y5F2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms